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Publications

CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.

Publications

Toward an Open Analysis Ecosystem for Plasmodium Genomic Epidemiology

Shazia Ruybal-Pesántez, Jorge Amaya-Romero, Sophie Bérubé, Nicholas F Brazeau, Mouhamadou F Diop, Nicholas Hathaway, Jason A Hendry, Kirsty McCann, Kathryn Murie, Maxwell Murphy, Karamoko Niaré, Jody Phelan, Stephen F Schaffner, Alfred Simkin, Aimee R Taylor, Bryan Greenhouse, Amy Wesolowski, Robert Verity

AutoBlot: deterministic single-cell western blotting reveals proteomic diversity in rare cell populations

Cyril Deroy, Md Nazibul Islam, Nadine Goldhammer, Lorraine Jiang, Jennifer M Rosenbluth, Amy E Herr

From the Laboratory to the Field: Assessing the Usability of the NTDscope in the Tropical Rainforest Region of Gabon

Rella Zoleko Manego, Lillian Rene Endamne, Victor Pahl, María Díaz de León Derby, Ghyslain Mombo-Ngoma, Daniel A Fletcher, Isaac I Bogoch, Michael Ramharter, Saskia Dede Davi

Longitudinal antibody profiling after dengue reveals distinct dynamics by antibody specificity over 18 months

Sandra Bos, Tulika Singh, José Victor Zambrana, Elias Duarte, Reinaldo Mercado-Hernandez, Julia Huffaker, Aaron Graber, Angel Balmaseda, Eva Harris

Unified climate factors predict influenza outbreak seasonality across tropical and temperate regions

Aleksandra R Stamper, Wenchang Yang, Caroline E Wagner, Ayesha S Mahmud, Rachel E Baker

Sustained high prevalence of multiple antimalarial drug resistance markers in Uganda in 2023–2024

Thomas Katairo, Victor Asua, Francis D Semakuba, Bienvenu Nsengimaana, Shahiid Kiyaga, Nicholas Hathaway, Kathryn Murie, Stephen Tukwasibwe, Innocent Wiringilimaana, Jackie Nakasaanyaa, Caroline Mwubaha, Karen B Achom, Trevor E Esilu, Alisen Ayitewalah, Monica Mbabazi, Kisakye D Kabbale, Jerry Mulondo, Eric Watyekele, Andrés Aranda-Diaz, Catherine S Maiteki, Jimmy Opigo, Grant Dorsey, Samuel L Nsobya, Moses R Kamya, Bosco B Agaba, Isaac Ssewanyana, Bryan Greenhouse, Philip J Rosenthal, Jessica Briggs, Melissa D Conrad

TRPV1 impacts O-glycosylated surface mucin distribution on the mouse corneal epithelium

Sara Abboud, Yujia Yang, Nathanael Harrison, Benjamin Smith, Namrita Naveen, Matthew Naidu, Irene L Chen, Stacy Malaker, David J Evans, Suzanne MJ Fleiszig

Corneal Neuroimmune Signatures of Childhood Adversity Identified Using Time-Lapse In Vivo Confocal Microscopy

Luisa H Colorado, Kerri Gillespie, Katie Edwards, David J Evans, Suzanne MJ Fleiszig, Selena F Bartlett

Acceptability and appropriateness of remote monitoring and self-administered pulse oximetry among COVID-19 patients in Honduras: a mixed-methods study

Kathryn W. Roberts, Berta Alvarez, Omar Diaz, Michael de St Aubin, Salome Garnier, Saul Cruz, Lorenzo Pavon, Angela Ochoa, Sogeiry Solis, Shiony Midence, Homer Mejía Santos, Jonatan Ochoa, Devan Dumas, Margaret Baldwin, C Daniel Schnorr, Alcides Martinez, Ligia Paina, Eric Nilles

Evaluating the impact of a low-cost food storage intervention on complementary food contamination and diarrheal disease in low-income urban households: A randomized controlled trial in Dhaka, Bangladesh

Musarrat Jabeen Rahman, Syeda Nurunnahar, Nazrin Akhter, Mahbubur Rahman, Mohammed Badrul Amin, Rehnuma Haque, Peter J Winch, Laura H Kwong

Apollo 3: Multi-Species Genome Curation

Garrett J Stevens, Kyösti Sutinen, Dario Beraldi, Shashank Budhanuru Ramaraju, Colin Diesh, William Haese-Hill, Peter Xie, Caroline Bridge, Adrien Morison, Angel Leung, Ulrike Böhme, Scott Cain, Nathan Dunn, Toby Hunt, Jane E Loveland, Adam Frankish, Alexie Papanicolau, Stefano Giorgetti, Jon Keatley, Bethany Flint, Lincoln Stein, Robert Buels, Matt Berriman, Ian Holmes

Foodborne sources of antimicrobial-resistant Escherichia coli in community-acquired urinary tract infections in Bangladesh

Mohammed Badrul Amin, Brandon M Flatgard, Kazi Injamamul Hoque, Rizwana Khan, Md Rayhanul Islam, Mahdia Rahman, Eva Raphael, Mohammad Aminul Islam

Structural Mechanism and Cellular Restriction of Tau Seeding from Endolysosomes

Eric Herrmann, Shuixia Tan, Kevin M Rose, Richard M Hooy, James H Hurley

Long-term patterns of health services utilization after hospitalization for COPD. A nationwide registry-based study from Norway

Jon Helgheim Holte, Tron Anders Moger, Anne Edvardsen, Trond Tjerbo, Nina Køpke Vøllestad, Ragnhild Hellesø, Alan Hubbard

A multi-omics study reveals pathway-level insights and predictive biomarkers in pediatric TB

Zaynab Mousavian, Mark R Segal, Roger I Calderon, Juaneta Luiz, Esin Nkereuwem, Peter Wambi, Mandar Paradkar, Molly F Franke, Gunilla Källenius, Beate Kampmann, Aarti Kinikar, George B Sigal, Christopher Sundling, Danielle L Swaney, Eric Wobudeya, Heather J Zar, Jeffrey M Collins, Adithya Cattamanchi, Joel D Ernst, Devan Jaganath

Identifying viral infections through metagenomic Next Generation Sequencing of undiagnosed respiratory fevers in Madagascar (2014–2019)

Sophie Lockwood, Hafaliana Christian Ranaivoson, Tsiry Hasina Randriambolamanantsoa, Norosoa Razanajatovo, Vololoniaina Raharinosy, Vida Ahyong, Jean-Michel Héraud, Philippe Dussart, Vincent Lacoste, Cara E Brook

User experiences with food storage in a meatsafe (mesh-covered food storage cabinet) in an informal settlement in Dhaka, Bangladesh

Musarrat Jabeen Rahman, Syeda Nurunnahar, Mahbubur Rahman, Laura H Kwong, Peter J Winch

Enhancing epidemic forecast usability for policymakers: A global mixed-methods study

Paula Christen, Loice Achieng Ombajo, Anne Cori, Jeanette Dawa, Bimandra A Djaafara, Teresia Njoki Kimani, Camille MJ Schneider, Sabine L van Elsland, Mwangi Thumbi, Maria Veras, Charles Whittaker, Lilith K Whittles, Oliver J Watson

First Therapeutic Efficacy Study (TES) in Djibouti: A Critical Milestone Amid Rising Regional Threats

Sinknesh Wolde Behaksra, Samatar Kayad Guelleh, Solomon Sisay, Yisihak Abreham Weldehana, Daniel Mussa Weyesa, Tirhas Endale, Assia Adlao Hamad, Natnael Lemessa Hundera, Dawit Hailu Alemayehu, Elias B Tafa, William Louie, Andres Aranda-Diaz, Meklit Shiferaw, Matiwos Kidane Ayele, Fikregabrail Aberra Kassa, Dagim Hailegebrel Lakew, Amanuel Shimelash, Betelhem Akililu Kebede, Melat Abdo, Migbaru Keffale, Yahya Osman Moussa, Tesfaye Sisay Tessema, Bryan Greenhouse, Abdoulilah Ahmed Abdi, Bouh Abdi Khaireh, Fitsum G Tadesse

Assembly and Reactions of Artificial Metalloenzymes in Streptomyces albus

Sukriyo Chakraborty, Soonkyu Hwang, Jing Huang, Dongping Chen, Yan Chen, Christopher J Petzold, Douglas S Clark, Aindrila Mukhopadhyay, Jay D Keasling, John F Hartwig