Matthew S Johnson, David Levine, Michael W Toffel
Publications
CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.
Circular RNAs Associated with Human Cytomegalovirus Infection
Cristian J Pagtalunan, Isadora Zhang, Fenyong Liu
Exploring transition metal complexes with large language models
Yunsheng Liu, Jacob Toney, Joseph Cavanagh, Kunyang Sun, Andrew Smith Smith, Chung-Yueh Yuan, Roland Gerard St. Michel, Paul A Graggs, F Dean Toste, Heather Kulik, Teresa Head-Gordon
Corneal Neuroimmune Signatures of Childhood Adversity Identified Using Time-Lapse In Vivo Confocal Microscopy
Carlos F Ng, Deepak Krishnamurthy, Andres Dextre, Aymeric Chorlay, Melanie Ott, Daniel A Fletcher
Location is information: an engineering framework for subcellular biology
Md Nazibul Islam, Xin Wang, Amy E Herr
Polarity-resolved imaging reveals active transport in catalytic Janus nanomotors
Isabel Panicker, Katherinne I. Requejo, Ricardo Ruiz, Assaf Ben-Moshe, Carlos Bustamante, A. Paul Alivisatos, Vida Jamali
Prevalence of congenital cytomegalovirus infection in a CMV-endemic Ugandan population
Amy KF Davis, Mary K Prahl, Mikias Ilala, Justine Levan, Pamela M Odorizzi, Mary Muhindo, Abel Kakuru, Stephanie L Gaw, Moses R Kamya, Grant Dorsey, Margaret E Feeney
Reconstitution of multistep recruitment of ULK1 to membranes in autophagy
Yongjia Duan, Ye Lu, Sanjoy Paul, Johannes Betz, Léa P Wilhelm, Annan SI Cook, Xuefeng Ren, Elias Adriaenssens, Sascha Martens, Ian G Ganley, Gerhard Hummer, James H Hurley
Arrayed hydrogels pair whole-cell imaging with single-cell mass spectrometry proteomics
Maya Overton, Cyril Deroy, Eileen Wang, Amber Lennon, Joshua E Elias, Ryan McClure, Amy E Herr
Ribosomal RNA methylation by GidB modulates discrimination of mischarged tRNA
Zhuo Bi, Yu-Xiang Chen, Iris D Young, Mohamad T Dandan, Hemant Joshi, Hong-Wei Su, Yuemeng Chen, Jiayao Hong, James S Fraser, Babak Javid
Using energy decomposition analysis from correlated wavefunction theory to characterize a range of hydrogen, halogen, and tetrel bonds: the relative importance of electrostatics, charge-transfer and polarization
Hengyuan Shen, Zhenling Wang, Kevin Ikeda, Dong Jun Shin, Matthias Loipersberger, Alexander Zech, Stefan Huber, Teresa Head-Gordon, Martin Head-Gordon
A curated benchmark for cofolding models on kinase conformational states
Kunyang Sun, Teresa Head-Gordon
The Impact of Respiratory Syncytial Virus Undertesting on Estimates of Disease Burden and Vaccine Effectiveness in a Large Integrated Healthcare System
Bradley K Ackerson, Brandon Chia, Negar Aliabadi, Gabriella Goodwin, Jeff Slezak, Vennis Hong, Qing Liu, Sally Shaw, Sabrina Welsh, Julie A Stern, Banshri Kapadia, Brigitte C Spence, Joseph A Lewnard, Gregg Davis, Evan J Zasowski, Michael Aragones, Ashley Miller, Michael Dutro, Erica Chilson, Elisa Gonzalez, Robin Hubler, Luis Jodar, Bradford D Gessner, Elizabeth Begier, Sara Y Tartof
Improving RNA secondary structure prediction through expanded training data
Conner J Langeberg, Taehan Kim, Roma Nagle, Agni Rajinikanth, Charlotte Meredith, Dimple A Garuadapuri, Jennifer Doudna, Jamie Cate
Barcoded mutant library enables high-throughput functional genomics in a filamentous fungus
Lori B Huberman, José M Villalobos-Escobedo, Jeffrey M Skerker, Ran Shi, Adriana M Rico-Ramírez, Catharine A Adams, Adam P Arkin, Adam M Deutschbauer, N Louise Glass
High rates of congenital CMV infection in a highly CMV-endemic Ugandan population
Amy KF Davis, Mary Prahl, Mikias Ilala, Justine Levan, Pam M Odorizzi, Mary K Muhindo, Abel Kakuru, Moses R Kamya, Grant Dorsey, Margaret E Feeney
Turning a biochemical GatCAB inhibitor into a live-cell active antibacterial probe through lipid and trehalose conjugation
Chawarat Isarangkool Na Ayutthaya, Anon Boonkerd, Wanchat Sirisarn, Nattanan Panjaworayan T-Thienprasert, Borvornwat Toviwek, Prapasiri Pongprayoon, Hemant Joshi, Babak Javid, Pitak Chuawong
The structure of the dopamine D3 receptor bound to cariprazine reveals principles for partial agonists with designed pharmacology
Eliane Hadas Yardeni, Dóra Judit Kiss, Julie Sanchez, Keshet Shavit, Dénes Szepesi Kovács, Attila Egyed, Caleb D Vogt, Supriya A Gaitonde, Jacqueline Glenn, Meritxell Canals, Michel Bouvier, Amy Hauck Newman, J Robert Lane, György M Keserű, Moran Shalev-Benami
Aiptasia larvae are phenotypically validated as a model of coral bleaching using high-throughput machine-learning image analysis
Iyla Rossi, Emily K Meier, Dania Nanes Sarfati, Francisco Guadalupe Zamora, Samantha Fung, Phillip A Cleves, Amy Herr
Emerging Patterns of Heat and Wildfire Smoke at California Correctional Facilities
Rachel Sklar, Samantha Kramer, Marissa Childs, Cecilia Martindale, Frederick Lurmann, Beck Kiely, Xinyang Li, Stefano Bertozzi, Elizabeth Noth