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Publications

CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.

Publications

Longitudinal single cell multi-omic profiling of Nicaraguan children reveals trajectories of pediatric immune development and variation 2840

Leon Bichmann, Nicholas Rachmaninoff, Stephen Popper, Neha Bansal, Galina Koroleva, Can Liu, Andrew Martins, Lionel Gresh, Jose Victor Zambrana, Aubree Gordon, Philip Johnson, Guillermina Kuan, Angel Balmaseda, Eva Harris, John Tsang

Back to Coley: rethinking bacteria as an anticancer agent 3409

Michel DuPage , Jesse Garcia Castillo , Timothy Campbell , Sebastian Fernandez , Diego Gonzalez Ventura , Jacob E. Williams , Jenna Vickery , Daniel A. Portnoy

Dynamics of antibody responses following primary dengue virus 3 infections in Nicaragua reveals differential waning of IgG responses by antigen and subclass 3546

Aquena Hana Ball, Elias Duarte, José Victor Zambrana, Sandra Bos, Agamjot Bal, Marco Antonio Chapa, Claudia Sanchez San Martin, Guillermina Kuan, Angel Balmaseda, Eva Harris

Diverse infection models demonstrate robust resistance of Mycobacterium tuberculosis to innate immunity [Pre-print]

Marian R Fairgrieve, Ella C Brydon, Roberto A Chavez, Dmitri I Kotov, Russell E Vance

Multiple roads lead to Rome: B cell imprinting in distinct sequential flavivirus infections reveals different pathways to acquiring virus-neutralizing antibodies 4434

Tulika Singh, Sandra Bos, Gerald Vásquez Alemán, Tiffany Kim, Miriam Walter, Nharae Lee, Elias Duarte, Aaron Graber, Amir Balakhmet, José Victor Zambrana, Jorge Ruiz Salinas, Federico Narvaez, Angel Balmaseda, Eun-Young Kim, Steven Wolinsky, Eva Harris

Circadian control of the innate immune response to plasmodium infection 4542

Bianca Parisi, Shawn Nguyen, Russell E Vance, Filipa Rijo-Ferreira

Comparing human pediatric immune responses to primary infection with dengue, chikungunya and Zika viruses

Lewis E Tomalin, Sandra Bos, Rafael Fenutria, Yitong Chen, Seunghee Kim-Schulze, Adeeb H Rahman, Angel Balmaseda, Ana Fernandez-Sesma, Eva Harris, Mayte Suaréz-Fariñas

Dengue Virus NS1 Binds Ephrin B1 to Trigger Endothelial Dysfunction [Pre-print]

Felix Pahmeier, Sabrina Rose Hammond, Charlotte Flory, Xinyi Feng, Saeyoung Elin Lee, Erika Vanessa Jimenez-Posada, Elias M Duarte, Jaime A Cardona-Ospina, Aquena H Ball, Nharae E Lee, Kayla Leung, Laurentia V Tjang, P Robert Beatty, Scott B Biering, Pietro Scaturro, Eva Harris

Assessment of exposure to zoonoses and perceptions of zoonotic transmission surrounding the Bwindi impenetrable forest, Uganda

Nahabwe Haven, Birungi Mutahunga, Scott Kellermann, Jalika Joyner, Julia Lippert, Evan Andrew Rusoja, Michael Wilkes, Gilbert Mateeka, Benard Ssebide, Charlotte  Aguti,Isaac Ahwera, Charles Mugisa, Felista Nanono, Prossy Katushabe, Nicole R. Gardner, Christine Kreuder Johnson, Tierra Smiley Evans 

Genomic Evolution of Vibrio cholerae O1 El Tor Strains and Climatic Factors in Driving Cholera Surges in Dhaka, Bangladesh, 1996-2024

Munirul Alam, Md Mamun Monir, Khalilur Rahman, Mohammad Islam, Marzia Sultana, Wali Ullah, Sardar Osail, Shirajum Monira, Kimberley Seed, Andrew Camilli, Carla Mavian, Nicholas Thomson, Rita R Colwell, Faruque, Tahmeed Ahmed

Shigella OspF blocks rapid p38-dependent priming of the NAIP–NLRC4 inflammasome

Elizabeth A Turcotte, Kyungsub Kim, Kevin D Eislmayr, Lisa Goers, Patrick S Mitchell, Cammie F Lesser, Russell E Vance

Impact of self-administered pulse oximetry among non-hospitalized patients at risk of severe COVID-19 in Honduras: A pragmatic, cluster-randomized trial with temporal clustering

Kathryn W. Roberts  Berta Alvarez, Michael de St. Aubin, Omar Diaz, Salomé Garnier, C. Daniel Schnorr, Saul Cruz, Lorenzo Pavon, Angela Ochoa, Rachel See, Shiony Medice, Homer Mejía Santos, Jonatán Ochoa, Sogeiry Solis, Devan Dumas, Margaret Baldwin, Alcides Martinez, Avi Hakim, Eric Nilles

Inferring the sensitivity of wastewater metagenomic sequencing for early detection of viruses: a statistical modelling study

Simon L Grimm, Jeff T Kaufman, Daniel P Rice, Charles Whittaker, William J Bradshaw, Michael R McLaren

Emergence of Dengue Virus Serotype 3, Lineage III_B. 3.2, Angola

Jocelyne Neto de Vasconcelos, Ingra M Claro, Raissa Heloisa de Araujo Eliodoro, Filipe RR Moreira, Amilton Pereira, Luzia Samuel, Esménia Coelho Rocha, Eusébio Manuel, Nelson Mapenzi-Kashali, Fiston Cikaya Kankolongo, Darlan S Cândido, Jaqueline Goes de Jesus, Gilda Mariano, Sofia Sousa, Carina Clemente, Cláudia Muenga, Ilaria Dorigatti, William M de Souza, Charles Whittaker, Victoria M Cox, Wes Hinsley, Nicholas Loman, Joshua Quick, Placide Mbala, Nuno R Faria, Joana Morais, FEEVIR Consortium

Mycobacterium tuberculosis triggers reduced inflammatory cytokine responses and virulence in mice lacking Tax1bp1

Jeffrey Chin, Nalin Abeydeera, Teresa Repasy, Rafael Rivera-Lugo, Gabriel Mitchell,Vinh Q Nguyen, Weihao Zheng, Alicia Richards, Erica Stevenson, Danielle L Swaney, Nevan J Krogan, Joel D Ernst, Jeffery S Cox, Jonathan M Budzik

The mevalonate pathway of isoprenoid biosynthesis supports metabolic flexibility in Mycobacterium marinum

 Christine M. Qabar, Edward E.K. Baidoo, Emine Akyuz Turumtay, Tariq M. Qayum, Jay D. Keasling, Cressida A. Madigan, Daniel A. Portnoy, Jeffery S. Cox

Serologic evidence of orthomarburgviruses and an orthoebolavirus in frugivorous Malagasy bats

Marana S. Rekedal, Emily Cornelius Ruhs, Hafaliana Christian Ranaivoson, Neil Mittal, Spencer L. Sterling, Gwenddolen Kettenburg, Angelo Andrianiaina, Santino Andry, Lianying Yan, Axel T. Lehrer, Jean-Michel Héraud, Vincent Lacoste, Philippe Dussart, Cara E. Brook & Eric D. Laing

Perturbed pediatric circulating metabolome in mild and severe dengue disease

Paul S Soma, Rebekah C Gullberg, Barbara Graham, M Nurul Islam, Guillermina Kuan, Angel Balmaseda, Carol D Blair, Barry J Beaty, John T Belisle, Eva Harris, Rushika Perera

The Kaposi’s sarcoma-associated herpesvirus TBP mimic uses a noncanonical DNA-binding mode to promote viral late gene transcription

Lidia E Llacsahuanga-Allcca, Allison L Didychuk, Anthony Rodríguez-Vargas, Britt A Glaunsinger