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Publications

CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.

Publications

Phosphorylation State Dictates Bacterial Stressosome Assembly and Function [Pre-print]

Elizabeth A. Martinez-Bond, Ivanna Lopez-Ayala, Mariya Lobanovska, Lisa Qiu, Virginia Garda, Zanlin Yu, Daniel A. Portnoy, Allison H. Williams

Serotype-specific epidemiological patterns of inapparent versus symptomatic primary dengue virus infections: a 17-year cohort study in Nicaragua

Sandra Bos, Jose Victor Zambrana, Elias Duarte, Aaron L Graber, Julia Huffaker, Carlos Montenegro, Lakshmanane Premkumar, Aubree Gordon, Guillermina Kuan, Angel Balmaseda, Eva Harris

Frequency of dengue virus–specific T cells is related to infection outcome in endemic settings

Rosa Isela Gálvez, Amparo Martínez-Pérez, E Alexandar Escarrega, Tulika Singh, José Víctor Zambrana, Ángel Balmaseda, Eva Harris, Daniela Weiskopf

Antibodies targeting Crimean-Congo hemorrhagic fever virus GP38 limit vascular leak and viral spread

Felix Pahmeier, Stephanie R Monticelli, Xinyi Feng, Christy K Hjorth, Albert Wang, Ana I Kuehne, Russell R Bakken, Thomas G Batchelor, Saeyoung E Lee, Marissa Middlecamp, Lauren Stuart, Amaro N Duarte-Neto, Dafna M Abelson, Jason S McLellan, Scott B Biering, Andrew S Herbert, Kartik Chandran, Eva Harris

Large-scale genomic surveillance reveals immunosuppression drives mutation dynamics in persistent SARS-CoV-2 infections [Pre-print]

Mark P Khurana, Alexandros Katsiferis, Neil Scheidwasser, Mathilde Marie Brünnich Sloth, Jacob Curran-Sebastian, Christian Morgenstern, Man-Hung Eric Tang, Jannik Fonager, Morten Rasmussen, Marc Stegger, Charles Whittaker, Danish COVID-19 Genome Consortium (DCGC), Sune Lehmann, Laust H Mortensen, Pikka Jokelainen, Moritz UG Kraemer, Neil M Ferguson, Mahan Ghafari, Tyra G Krause, David A Duchêne, Samir Bhatt

Tracking the genetic diversity of SARS-CoV-2 variants in Nicaragua throughout the COVID-19 pandemic

Gerald Vásquez Alemán, Cristhiam Cerpas, Jose G Juarez, Hanny Moreira, Sonia Arguello, Josefina Coloma, Eva Harris, Aubree Gordon, Shannon N Bennett, Ángel Balmaseda

Dengue Transmission Dynamics and Spread in Angola: A Phylogenetic and Cross-Sectional Seroprevalence Study [Preprint]

Jocelyne Neto de Vasconcelos, Charles Whittaker, Lewis Buss, Carina R. Clemente, Líbia Zé-Zé, Filipe Romero Rebello Moreira, Ingra Morales Claro, Oliver Brady, Jack Wardle, Marcelo U. Ferreira, Filomeno Fortes, Ralph Huits, Claudia Muenga, Eusébio Manuel, Nicolás T. Domínguez, Zulma M. Cucunubá, Ben Lambert, Maria-João Alves, Placide Mbala, Ilaria Dorigatti, Joana Filipa Machado Morais, Nuno R. Faria
 

Perception of a pathogenic signature initiates intergenerational protection

Corinne L Pender, Julian G Dishart, Holly K Gildea, Kelsie M Nauta, Emily M Page, Talha F Siddiqi, Shannon S Cheung, Larry Joe, Nicholas O Burton, Andrew Dillin

Social desirability bias in a randomized controlled trial that included breastfeeding promotion in western Kenya

Christine P Stewart, Charles D Arnold, Anne M Williams, Benjamin F Arnold, Amy J Pickering, Holly Dentz, Marion Kiprotich, Audrie Lin, Clair Null, John M Colford Jr, Kathryn G Dewey

Capturing dynamic phage-pathogen coevolution by clinical surveillance

Mathur, Yamini, Boyd, Caroline, Farnham, Jeannette, Monir, Md, Islam, Mohammad Tarequl, Sultana, Marzia, Ahmed, Tahmeed, Alam, Munirul, Seed, Kimberley

Capturing dynamic phage-pathogen coevolution by clinical surveillance [Pre-print]

Mathur Y*, Boyd CM*, Farnham JE, Monir MM, Islam MT, Sultana M, Ahmed T, Alam, M and Seed KD

Environmental surveillance of soil-transmitted helminths and other enteric pathogens in settings without networked wastewater infrastructure

Joël Edoux Eric Siko, Kendra Joy Dahmer, Zayina Zondervenni Manoharan, Ajithkumar Muthukumar, Heather K Amato, Christopher LeBoa, Michael Harris, Venkateshprabhu Janagaraj, Malathi Manuel, Tintu Varghese, Parfait Houngbegnon, Nils Pilotte, Bernadin Bouko, Souad Saïdou, Adrian JF Luty, Rohan Michael Ramesh, Moudachirou Ibikounlé, Sitara SR Ajjampur, Amy J Pickering

Diversity and seasonality of ectoparasite burden on two species of Madagascar fruit bat, Eidolon dupreanum and Rousettus madagascariensis [Preprint]

Angelo F Andrianiaina, Santino Andry, Gwenddolen Kettenburg, Hafaliana Christian Ranaivoson, Vincent Lacoste, Philippe Dussart, Jean-Michel Heraud, Theresa M Laverty, Sarah Guth, Katherine I Young, Aristide Andrianarimisa, Cara E Brook

Gut Passage in Lemurs Enhances the Germination of Mistletoe Seeds Bakerella gonoclada, in a Madagascar Rainforest

Zo Samuel Ella Fenosoa, Cara E. Brook, Amy E. Dunham, Hajanirina F. Rakotomanana, Hanta Razafindraibe, Kacie A. Ring

Enhanced testing can substantially improve defense against several types of respiratory virus pandemic

James Petrie, James A Hay, Oraya Srimokla, Jasmina Panovska-Griffiths, Charles Whittaker, Joanna Masel

Dengue severity by serotype and immune status in 19 years of pediatric clinical studies in Nicaragua

Federico Narvaez, Carlos Montenegro, Jose G Juarez, José Victor Zambrana, Karla Gonzalez, Elsa Videa, Sonia Arguello, Fanny Barrios, Sergio Ojeda, Miguel Plazaola, Nery Sanchez, Daniel Camprubí-Ferrer, Guillermina Kuan, Gabriela Paz Bailey, Eva Harris, Angel Balmaseda

Water, sanitation, handwashing, and nutritional interventions can reduce child antibiotic use: evidence from Bangladesh and Kenya

Ayse Ercumen, Andrew N Mertens, Zachary Butzin-Dozier, Da Kyung Jung, Shahjahan Ali, Beryl S Achando, Gouthami Rao, Caitlin Hemlock, Amy J Pickering, Christine P Stewart, Sophia T Tan, Jessica A Grembi, Jade Benjamin-Chung, Marlene Wolfe, Gene G Ho, Md Ziaur Rahman, Charles D Arnold, Holly N Dentz, Sammy M Njenga, Theodora Meerkerk, Belinda Chen, Maya Nadimpalli, Mohammad Aminul Islam, Alan E Hubbard, Clair Null, Leanne Unicomb, Mahbubur Rahman, John M Colford Jr, Stephen P Luby, Benjamin F Arnold, Audrie Lin

Picornaviridae and Caliciviridae diversity in Madagascar fruit bats is driven by cross-continental genetic exchange

Gwenddolen Kettenburg,  Hafaliana C. Ranaivoson, Angelo Andrianianina,  Santino Andry, Amy R. Henry, Rachel L. Davis, Farida Laboune, Elizabeth R. Longtine, Sucheta Godbole,  Sophia Horigan,  View Emily Cornelius Ruhs, Vololoniaina Raharinosy, Tsiry Hasina Randriambolamanantsoa, Vincent Lacoste, Jean-Michel Heraud, Philippe Dussart, Daniel C. Douek, Cara E. Brook